PPDB

PPDB	The Plant Proteome Database

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AT2G24120.1 DNA/RNA polymerases superfamily protein

Lab Annot.

RpoTp or RpoT-3 -Nuclear-encoded RNA polymerase (NEP) also SCABRA3
Mapman: 27.2 RNA.transcription

Curated Location

plastid (Pubmed: 23198870 16698900 10205908 18431481 )

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G24120.2 11 Arabidopsis thaliana 0 885 100 100 0 (0) C
AT1G68990.1 11 Arabidopsis thaliana 0 851 62 79 0 (0) M
AT5G15700.1 11 Arabidopsis thaliana 0 850 63 78 0 (0) C
Os09g07120.1 7 Oryza sativa 0 845 65 82 0 (0) C
Os06g44230.1 7 Oryza sativa 0 836 62 81 0 (0) C
Os09g07120.2 7 Oryza sativa 0 776 64 80 0 (0) C
GRMZM2G381395_P01 3.21 Zea mays 0 846 65 81 0 (0) M
v1_GRMZM2G381395_P01 4a53 Zea mays 0 846 65 81 0 (0) M
Zm00001eb327720_P001 agpv5 Zea mays 0 846 65 81 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	RNA_pol(1) RPOL_N(1)
TargetP:	Chloroplast (Class 1 C0.970; M0.030; S0.001; _0.043)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	993 aa (-cTP 898)
Molecular Weight	112.62 kDA(-cTP 102.35)
PI	9.29(-cTP 9.28)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19452453(14-3-3-interacting proteins)
19995723(chloroplast reference proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data