PPDB

PPDB	The Plant Proteome Database

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AT2G23980.1 cyclic nucleotide-gated channel 6

Lab Annot.

Mapman: 34.22 transport.cyclic nucleotide or calcium regulated channels

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23980.10 11 Arabidopsis thaliana 0 747 100 100 0 (0) _
AT2G23980.5 11 Arabidopsis thaliana 0 747 100 100 0 (0) _
AT2G23980.9 11 Arabidopsis thaliana 0 747 100 100 0 (0) _
Os04g55080.1 7 Oryza sativa 0 748 60 73 0 (0) C
Os03g44440.1 7 Oryza sativa 0 697 62 77 0 (0) _
Os12g28260.1 7 Oryza sativa 0 760 58 74 0 (0) _
Zm00001eb068710_P002 agpv5 Zea mays 0 749 60 73 0 (0) _
Zm00001eb068710_P005 agpv5 Zea mays 0 749 60 73 0 (0) _
Zm00001eb068710_P003 agpv5 Zea mays 0 749 60 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	cNMP_binding(1) Ion_trans(1) Ion_trans_2(1) IQ(1)
TargetP:	Cytoplasm (Class 3 C0.150; M0.209; S0.012; _0.710)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	5 TMs
TAT position:
Length	747 aa (-cTP 691)
Molecular Weight	85.44 kDA(-cTP )
PI	9.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16502469(cell suspension-Cd-up)
17317660(Plasma Membrane proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data