PPDB

The Plant Proteome Database

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AT2G23940.1   transmembrane protein (DUF788)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G23940.3 11Arabidopsis thaliana2E-1281731001000 (0)_
AT2G23940.2 11Arabidopsis thaliana2E-1281731001000 (0)_
AT4G30500.1 11Arabidopsis thaliana1E-10017376890 (0)M
Os02g44690.1 7Oryza sativa3E-6217460771 (1)_
Zm00001eb186920_P001 agpv5Zea mays2E-7317469820 (0)_
v1_GRMZM2G046348_P02 4a53Zea mays2E-7317469820 (0)_
GRMZM2G046348_P02 3.21Zea mays2E-7317469820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2198(2) DUF4519(3) IBV_3C(2) TMEM208_SND2(1)
TargetP: Cytoplasm (Class 4 C0.035; M0.426; S0.047; _0.739)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 173 aa (-cTP 148)
Molecular Weight 19.63 kDA(-cTP )
PI 9.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help