PPDB

The Plant Proteome Database

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AT2G23810.1   tetraspanin8

Lab Annot. TET8 (TETRASPANIN8)
Mapman: 33.99 development.unspecified
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G30430.1 11Arabidopsis thaliana1E-13927167820 (0)S
AT4G28050.1 11Arabidopsis thaliana5E-13426167810 (0)S
AT3G45600.1 11Arabidopsis thaliana3E-8726546655 (5)S
Os09g25760.1 7Oryza sativa7E-11726261780 (0)S
Os08g34460.1 7Oryza sativa3E-10927152711 (1)S
Os08g16050.1 7Oryza sativa1E-8526649660 (0)S
Zm00001eb313460_P001 agpv5Zea mays3E-12426462780 (0)S
GRMZM2G041175_P01 3.21Zea mays3E-12426462782 (2)S
v1_GRMZM2G041175_P01 4a53Zea mays3E-12426462785 (5)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2TM(2) ABC2_membrane_2(1) Cadherin_C_2(2) CitMHS(1) DUF1772(2) DUF2207(2) DUF313
TargetP: Secreted (Class 1 C0.001; M0.050; S0.976; _0.060)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 1 TMs
TAT position:
Length 273 aa (-cTP 270)
Molecular Weight 30.66 kDA(-cTP )
PI 8.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
21533090(plasmodesmata-crude)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help