PPDB

 The Plant Proteome Database

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AT2G23800.1   geranylgeranyl pyrophosphate synthase 2
Lab Annot.
Mapman: 16.1.1.10 secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase
Curated Location
TAIR curated location: endoplasmic reticulum10759500
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G18640.1 11Arabidopsis thaliana038368820 (0)S
AT4G36810.1 11Arabidopsis thaliana4E-1582997186236 (164)C
AT2G18620.1 11Arabidopsis thaliana3E-15130467830 (0)C
Os07g39270.1 7Oryza sativa1E-1103046174117 (117)M
Os07g39270.2 7Oryza sativa1E-1103046174117 (117)M
Os01g14630.1 7Oryza sativa4E-10629855720 (0)C
Zm00001eb325560_P001 agpv5Zea mays1E-11436154670 (0)M
GRMZM2G102550_P01 3.21Zea mays8E-11436154672 (2)C
v1_GRMZM2G102550_P01 4a53Zea mays8E-11436154671 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: polyprenyl_synt(1)
TargetP: Secreted (Class 1 C0.008; M0.099; S0.941; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 376 aa (-cTP 325)
Molecular Weight 41.34 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help