PPDB

PPDB	The Plant Proteome Database

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AT2G23780.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23780.2 11 Arabidopsis thaliana 5E-172 227 100 100 0 (0) _
AT2G23780.3 11 Arabidopsis thaliana 5E-172 227 100 100 0 (0) _
AT1G19310.1 11 Arabidopsis thaliana 8E-66 168 61 74 0 (0) _
Os12g43930.1 7 Oryza sativa 1E-65 222 52 61 0 (0) _
Os03g47500.2 7 Oryza sativa 1E-61 239 50 60 0 (0) _
Os03g47500.1 7 Oryza sativa 1E-61 239 50 60 0 (0) _
Zm00001eb051980_P001 agpv5 Zea mays 1E-61 232 52 62 0 (0) _
v1_GRMZM2G152461_P02 4a53 Zea mays 1E-61 187 55 66 0 (0) C
Zm00001eb152120_P003 agpv5 Zea mays 1E-61 187 55 66 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_IE-1(1) IBR(2) Prok-RING_4(1) U-box(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4
TargetP:	Cytoplasm (Class 1 C0.153; M0.051; S0.045; _0.969)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	3 TMs
TAT position:
Length	227 aa (-cTP 224)
Molecular Weight	25.18 kDA(-cTP )
PI	7.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data