PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G23640.1 Reticulan like protein B13

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10915.3 11 Arabidopsis thaliana 5E-20 176 24 51 0 (0) M
AT3G10915.6 11 Arabidopsis thaliana 3E-19 178 25 51 0 (0) _
AT2G46170.1 11 Arabidopsis thaliana 5E-19 171 27 51 1 (1) _
Os05g45050.1 7 Oryza sativa 2E-20 184 28 48 15 (15) _
Os02g16620.1 7 Oryza sativa 4E-20 188 24 50 0 (0) _
Os06g30750.1 7 Oryza sativa 2E-18 171 23 49 15 (15) _
GRMZM2G142409_P03 3.21 Zea mays 8E-20 172 26 50 0 (0) _
v1_GRMZM2G142409_P03 4a53 Zea mays 8E-20 172 26 50 0 (0) _
GRMZM2G142409_P01 3.21 Zea mays 1E-19 171 26 50 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Choline_transpo(1) DUF2937(1) Halogen_Hydrol(2) Reticulon(1)
TargetP:	Cytoplasm (Class 1 C0.019; M0.060; S0.020; _0.980)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	3 TMs
TAT position:
Length	206 aa (-cTP 115)
Molecular Weight	23.77 kDA(-cTP )
PI	6.98(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data