PPDB

The Plant Proteome Database

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AT2G23420.1   nicotinate phosphoribosyltransferase 2

Lab Annot. nicotinate phosphoribosyltransferase protein / NAPRTase protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G23420.2 11Arabidopsis thaliana05331001000 (0)_
AT4G36940.1 11Arabidopsis thaliana055988945 (5)_
Os03g62110.2 7Oryza sativa054080875 (5)_
Os04g35060.1 7Oryza sativa054379882 (2)C
Os03g62110.3 7Oryza sativa054076835 (5)_
GRMZM5G862488_P04 3.21Zea mays054081882 (2)_
Zm00001eb063870_P002 agpv5Zea mays054081880 (0)_
GRMZM5G862488_P03 3.21Zea mays055279860 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAPRTase(1) NAPRTase_C(1) NAPRTase_N(2) QRPTase_N(2)
TargetP: Cytoplasm (Class 2 C0.130; M0.129; S0.055; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 557 aa (-cTP 522)
Molecular Weight 62.27 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type
1114Detail        [A. thaliana] RARE1 co-IP rare-1
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19888209(leaves)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


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