PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G23420.1 nicotinate phosphoribosyltransferase 2

Lab Annot.

nicotinate phosphoribosyltransferase protein / NAPRTase protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23420.2 11 Arabidopsis thaliana 0 533 100 100 0 (0) _
AT4G36940.1 11 Arabidopsis thaliana 0 559 88 94 5 (5) _
Os03g62110.2 7 Oryza sativa 0 540 80 87 5 (5) _
Os04g35060.1 7 Oryza sativa 0 543 79 88 2 (2) C
Os03g62110.3 7 Oryza sativa 0 540 76 83 5 (5) _
GRMZM5G862488_P04 3.21 Zea mays 0 540 81 88 3 (2) _
Zm00001eb063870_P002 agpv5 Zea mays 0 540 81 88 0 (0) _
GRMZM5G862488_P03 3.21 Zea mays 0 552 79 86 1 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	NAPRTase(1) NAPRTase_C(1) NAPRTase_N(2) QRPTase_N(2)
TargetP:	Cytoplasm (Class 2 C0.130; M0.129; S0.055; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	557 aa (-cTP 522)
Molecular Weight	62.27 kDA(-cTP )
PI	5.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1113	Detail								[A. thaliana]	control for RARE-1 co-IP	wild-type
1114	Detail								[A. thaliana]	RARE1 co-IP	rare-1
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19888209(leaves)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data