PPDB

PPDB	The Plant Proteome Database

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AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain-containing protein

Lab Annot.

PUB4 - E3-ligase (also involved in chloroplast degradation; Woodson et al 2015 Science)
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G23140.4 11 Arabidopsis thaliana 0 826 100 100 0 (0) _
AT2G23140.2 11 Arabidopsis thaliana 0 826 100 100 0 (0) _
AT2G23140.5 11 Arabidopsis thaliana 0 637 100 100 0 (0) _
Os08g01900.1 7 Oryza sativa 0 824 51 66 9 (9) _
Os01g66130.1 7 Oryza sativa 0 834 47 60 0 (0) _
Os06g01304.3 7 Oryza sativa 1E-74 272 51 69 0 (0) _
Zm00001eb260470_P006 agpv5 Zea mays 0 849 49 63 0 (0) M
GRMZM2G057436_P02 3.21 Zea mays 0 849 49 63 1 (1) _
GRMZM2G057436_P01 3.21 Zea mays 0 849 49 63 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(7) Arm_2(2) HEAT_2(3) KAP(2) Ssu72(1) U-box(1) zf-NOSIP(1)
TargetP:	Cytoplasm (Class 4 C0.038; M0.088; S0.407; _0.748)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	829 aa (-cTP 822)
Molecular Weight	90.34 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data