PPDB

The Plant Proteome Database

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AT2G23120.1   Late embryogenesis abundant protein%2C group 6

Lab Annot. Late embryogenesis abundant protein, group 6
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G23110.2 11Arabidopsis thaliana1E-187055740 (0)_
AT2G23110.1 11Arabidopsis thaliana1E-187055740 (0)_
AT2G33690.1 11Arabidopsis thaliana5E-124961710 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_6(1)
TargetP: Cytoplasm (Class 2 C0.161; M0.088; S0.100; _0.921)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 83 aa (-cTP 66)
Molecular Weight 8.48 kDA(-cTP )
PI 4.46(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1398Detail       leaf [A. thaliana] total leaf tissue 1.14 Prep1_Prep2
1420Detail        [A. thaliana]  
1427Detail        [A. thaliana] total leaf tissue 1.11 wild-type
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help