PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G23010.1   serine carboxypeptidase-like 9
Lab Annot. serine carboxypeptidase-like 9
Mapman: 29.5.5.5.1* protein.degradation.serine protease.SC.S10
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G23010.2 11Arabidopsis thaliana043799997 (1)S
AT2G22990.1 11Arabidopsis thaliana04377787153 (94)S
AT2G23000.2 11Arabidopsis thaliana042178870 (0)S
Os10g01110.1 7Oryza sativa5E-13741847650 (0)M
Os03g52040.2 7Oryza sativa1E-13644445630 (0)M
Os04g09720.1 7Oryza sativa2E-13643445620 (0)S
Zm00001eb225050_P001 agpv5Zea mays2E-14445445640 (0)S
Zm00001eb081590_P001 agpv5Zea mays5E-13846043610 (0)M
Zm00001eb098370_P001 agpv5Zea mays1E-13646843610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Peptidase_S10(1) UCR_hinge(1)
TargetP: Secreted (Class 2 C0.018; M0.106; S0.877; _0.073)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 437 aa (-cTP 422)
Molecular Weight 49.76 kDA(-cTP )
PI 6.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help