PPDB

The Plant Proteome Database

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AT2G22400.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot. NOL1/NOP2/sun protein
Mapman: 27 RNA
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G40000.1 11Arabidopsis thaliana080267770 (0)M
AT4G40000.2 11Arabidopsis thaliana058162750 (0)_
AT5G55920.1 11Arabidopsis thaliana2E-1419927432 (2)M
Os09g29630.1 7Oryza sativa0847546814 (14)M
Os08g37780.1 7Oryza sativa080751670 (0)C
Os08g37780.2 7Oryza sativa069252680 (0)_
v1_GRMZM2G063517_P02 4a53Zea mays0749486113 (13)M
GRMZM2G063517_P03 3.21Zea mays0658526617 (17)_
v1_GRMZM2G063517_P03 4a53Zea mays0658526613 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FtsJ(2) Methyltr_RsmB-F(2)
TargetP: Cytoplasm (Class 5 C0.041; M0.542; S0.030; _0.716)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 808 aa (-cTP 780)
Molecular Weight 89.81 kDA(-cTP )
PI 5.77(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help