PPDB

PPDB	The Plant Proteome Database

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AT2G22290.1 RAB GTPase homolog H1D

Lab Annot.

Ras-related GTP-binding protein, putative
Mapman: 30.5 signalling.G-proteins

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G10260.1 11 Arabidopsis thaliana 8E-138 207 89 95 26 (26) _
AT2G44610.1 11 Arabidopsis thaliana 5E-127 208 83 89 121 (107) _
AT4G39890.1 11 Arabidopsis thaliana 2E-120 214 82 88 21 (21) S
Os07g31370.1 7 Oryza sativa 2E-121 208 84 89 44 (44) _
Os03g09140.1 7 Oryza sativa 2E-120 211 76 87 0 (0) S
Os03g09140.2 7 Oryza sativa 7E-96 157 84 92 0 (0) S
Zm00001eb105510_P001 agpv5 Zea mays 8E-127 208 84 89 0 (0) _
GRMZM2G169694_P01 3.21 Zea mays 8E-127 208 84 89 75 (40) _
GRMZM2G075719_P01 3.21 Zea mays 4E-126 208 83 89 75 (40) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_7(1) Arf(1) Dynamin_N(2) FeoB_N(1) GTP_EFTU(1) Gtr1_RagA(1) MMR_HSR1(1) Ras(
TargetP:	Cytoplasm (Class 4 C0.058; M0.120; S0.380; _0.612)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	207 aa (-cTP 179)
Molecular Weight	23.11 kDA(-cTP )
PI	6.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data