PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G22200.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39780.1 11Arabidopsis thaliana5E-9626559670 (0)_
AT5G65130.2 11Arabidopsis thaliana2E-5325145570 (0)_
AT5G65130.1 11Arabidopsis thaliana2E-5325145570 (0)_
Os08g31580.1 7Oryza sativa1E-5125240550 (0)_
Os03g09170.1 7Oryza sativa3E-4526939530 (0)_
Os02g51670.1 7Oryza sativa1E-4219446570 (0)_
Zm00001eb372660_P001 agpv5Zea mays2E-4925041540 (0)_
GRMZM5G852704_P01 3.21Zea mays2E-4925041540 (0)_
Zm00001eb401290_P001 agpv5Zea mays3E-4927039530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) Dicer_dimer(2)
TargetP: Chloroplast (Class 5 C0.458; M0.076; S0.025; _0.444)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 261 aa (-cTP 198)
Molecular Weight 29.79 kDA(-cTP 22.69)
PI 6.55(-cTP 5.25)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help