PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G22090.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding

Curated Location

TAIR curated location: nucleus0012024044

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G22090.2 11 Arabidopsis thaliana 0 343 100 100 0 (0) _
AT2G22100.1 11 Arabidopsis thaliana 1E-52 258 43 58 0 (0) _
AT2G19380.1 11 Arabidopsis thaliana 2E-52 269 40 56 0 (0) _
Os01g16090.1 7 Oryza sativa 2E-37 129 51 68 26 (26) M
Os01g42820.2 7 Oryza sativa 1E-23 118 44 62 18 (18) _
Os01g42820.1 7 Oryza sativa 1E-23 118 44 62 18 (18) _
Zm00001eb128200_P001 agpv5 Zea mays 2E-35 151 43 63 0 (0) M
GRMZM2G132465_P03 3.21 Zea mays 2E-35 151 43 63 2 (1) M
GRMZM2G132465_P02 3.21 Zea mays 2E-35 151 43 63 2 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AF-4(1) Arm-DNA-bind_4(1) COG4(1) Cwf_Cwc_15(1) DUF2076(2) RRM_1(2) RRM_7(1) SEE
TargetP:	Cytoplasm (Class 5 C0.358; M0.200; S0.022; _0.515)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	343 aa (-cTP 299)
Molecular Weight	36.15 kDA(-cTP )
PI	8.73(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data