PPDB

 The Plant Proteome Database

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AT2G21630.1   Sec23/Sec24 protein transport family protein
Lab Annot. transport protein, putative
Mapman: 29.3.4.2 protein.targeting.secretory pathway.golgi
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G14160.2 11Arabidopsis thaliana07655675109 (42)_
AT3G23660.1 11Arabidopsis thaliana0772567314 (0)_
AT4G14160.1 11Arabidopsis thaliana0766567581 (39)_
Os08g36994.1 7Oryza sativa076666801 (1)_
Os08g36994.2 7Oryza sativa072367811 (1)_
Os09g28610.1 7Oryza sativa076564770 (0)_
v1_GRMZM2G045987_P01 4a53Zea mays0772567320 (19)C
GRMZM2G045987_P01 3.21Zea mays0772567384 (32)C
Zm00001eb100920_P001 agpv5Zea mays043064810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Fer4_14(1) Gelsolin(1) Sec23_BS(1) Sec23_helical(1) Sec23_trunk(1) Vps36-NZF-N(1
TargetP: Cytoplasm (Class 1 C0.072; M0.078; S0.008; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 761 aa (-cTP 702)
Molecular Weight 84.60 kDA(-cTP )
PI 5.71(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

 19888209(leaves)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help