PPDB

The Plant Proteome Database

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AT2G21600.1   endoplasmatic reticulum retrieval protein 1B

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
TAIR curated location: Golgi cis face & Golgi apparatus10972878
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39220.1 11Arabidopsis thaliana1E-11819684894 (4)_
AT4G39220.2 11Arabidopsis thaliana1E-11819684890 (0)_
AT2G23310.1 11Arabidopsis thaliana2E-7417858730 (0)_
Os01g01640.1 7Oryza sativa2E-91162778718 (18)_
Os06g49460.1 7Oryza sativa9E-9117572821 (1)_
Os08g21760.1 7Oryza sativa6E-7417163780 (0)_
GRMZM2G078941_P01 3.21Zea mays5E-9517075887 (7)_
Zm00001eb334220_P001 agpv5Zea mays5E-9517075880 (0)_
v1_GRMZM2G078941_P01 4a53Zea mays5E-9517075882 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rer1(1)
TargetP: Cytoplasm (Class 2 C0.015; M0.162; S0.019; _0.947)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 195 aa (-cTP 181)
Molecular Weight 22.42 kDA(-cTP )
PI 9.42(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(ER-LOPIT-callus)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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