PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G21470.2   SUMO-activating enzyme 2

Lab Annot. SUMO-activating enzyme 2
Mapman: 29.5.11.2 protein.degradation.ubiquitin.E1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21470.1 11Arabidopsis thaliana053110010014 (2)S
AT2G21470.3 11Arabidopsis thaliana0534999910 (1)S
AT5G19180.2 11Arabidopsis thaliana3E-3720437570 (0)_
Os07g39780.2 7Oryza sativa052276885 (5)_
Os07g39780.1 7Oryza sativa052376885 (5)_
Os07g39780.3 7Oryza sativa039779884 (4)_
Zm00001eb108060_P001 agpv5Zea mays053075860 (0)_
Zm00001eb325940_P001 agpv5Zea mays053075860 (0)S
v1_GRMZM2G108229_P02 4a53Zea mays053075862 (2)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NAD_binding_7(2) Pyr_redox(2) Sacchrp_dh_NADP(1) Shikimate_DH(1) ThiF(1) UAE_UbL
TargetP: Secreted (Class 4 C0.008; M0.113; S0.780; _0.410)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 700 aa (-cTP 685)
Molecular Weight 78.52 kDA(-cTP )
PI 5.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2600Detail       rosettes [A. thaliana] total leaf tissue fmtclpc1
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help