PPDB

The Plant Proteome Database

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AT2G21340.1   MATE efflux family protein

Lab Annot. MatE domain protein (transport)
Mapman: 34 transport
Curated Location envelope (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21340.2 11Arabidopsis thaliana055999991 (1)C
AT4G39030.1 11Arabidopsis thaliana045469830 (0)M
AT2G38330.1 11Arabidopsis thaliana1E-1942424450 (0)C
Os02g02980.1 7Oryza sativa046564770 (0)C
Os02g02980.2 7Oryza sativa2E-15637962740 (0)C
Os09g37610.1 7Oryza sativa7E-1849024420 (0)_
v1_GRMZM2G065154_P01 4a53Zea mays046064784 (4)C
GRMZM2G065154_P01 3.21Zea mays046064783 (3)C
Zm00001eb230490_P001 agpv5Zea mays042365790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MatE(2) Phageshock_PspD(2) Polysacc_synt_C(4)
TargetP: Chloroplast (Class 1 C0.969; M0.034; S0.013; _0.036)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 8 TMs
Aramemnon: 9 TMs
TAT position:
Length 559 aa (-cTP 499)
Molecular Weight 60.00 kDA(-cTP 53.31)
PI 8.21(-cTP 5.50)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21693672(wound-regulated leaf proteome (AOS mutant))
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help