PPDB

The Plant Proteome Database

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AT2G21270.1   ubiquitin fusion degradation 1

Lab Annot. ubiquitin fusion degradation 1
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21270.4 11Arabidopsis thaliana03191001000 (0)_
AT2G21270.5 11Arabidopsis thaliana03191001000 (0)_
AT2G21270.2 11Arabidopsis thaliana03191001002 (0)_
Os04g48770.1 6Oryza sativa2E-14932764750 (0)_
Os02g08480.1 7Oryza sativa3E-146320677610 (10)_
Os04g48770.2 7Oryza sativa5E-11427362730 (0)_
Zm00001eb206740_P001 agpv5Zea mays4E-15332068780 (0)_
GRMZM2G037185_P01 3.21Zea mays4E-15332068782 (2)_
v1_GRMZM2G037185_P01 4a53Zea mays4E-15332068782 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UFD1(1)
TargetP: Cytoplasm (Class 2 C0.049; M0.228; S0.067; _0.871)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 319 aa (-cTP 290)
Molecular Weight 35.32 kDA(-cTP )
PI 6.27(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help