PPDB

PPDB	The Plant Proteome Database

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AT2G21060.1 glycine-rich protein 2B

Lab Annot.

cold-shock DNA-binding protein / glycine-rich protein (atGRP2)
Mapman: 20.2.2 stress.abiotic.cold

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G38680.1 11 Arabidopsis thaliana 6E-51 199 70 75 213 (124) _
AT4G36020.2 11 Arabidopsis thaliana 6E-30 187 43 55 0 (0) _
AT4G36020.1 11 Arabidopsis thaliana 1E-28 183 43 55 21 (8) _
Os02g02870.1 7 Oryza sativa 3E-34 187 54 63 48 (48) _
Os08g03520.1 7 Oryza sativa 3E-33 195 57 66 43 (43) _
Os01g36570.1 7 Oryza sativa 3E-17 69 49 69 0 (0) _
Zm00001eb208310_P003 agpv5 Zea mays 5E-38 189 52 61 0 (0) M
v1_GRMZM2G389768_P02 4a53 Zea mays 1E-37 189 52 61 87 (87) M
Zm00001eb208310_P001 agpv5 Zea mays 1E-37 189 52 61 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CSD(1) OB_RNB(1) zf-CCHC(2) zf-CCHC_2(2) zf-CCHC_3(2) zf-CCHC_4(2) zf-CCHC_5(2)
TargetP:	Cytoplasm (Class 2 C0.148; M0.096; S0.027; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	201 aa (-cTP 146)
Molecular Weight	19.08 kDA(-cTP )
PI	6.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
352	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1410	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1932	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2221	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19672695(oligo(dT) mRNA-binding proteins (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data