PPDB

The Plant Proteome Database

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AT2G20940.1   transmembrane protein%2C putative (DUF1279)

Lab Annot. unknown function (DUF1279)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20940.2 11Arabidopsis thaliana8E-921291001000 (0)S
Os09g36982.1 7Oryza sativa1E-4013250691 (1)M
GRMZM2G020255_P02 3.21Zea mays3E-35143456510 (10)M
GRMZM2G020255_P01 3.21Zea mays3E-35143456510 (10)M
Zm00001eb331780_P002 agpv5Zea mays3E-3514345650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1279(1)
TargetP: Secreted (Class 4 C0.002; M0.202; S0.614; _0.413)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 129 aa (-cTP 105)
Molecular Weight 14.14 kDA(-cTP )
PI 9.95(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
21841088(mitochondria (2DE native gel))

Comparative Proteomics Data


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