PPDB

 The Plant Proteome Database

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AT2G20930.1   SNARE-like superfamily protein
Lab Annot. SNARE-like protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80500.1 11Arabidopsis thaliana6E-10139284944 (12)_
AT1G80500.2 11Arabidopsis thaliana6E-1013928490 (0)_
Os09g36976.1 7Oryza sativa3E-8413882909 (9)S
Os02g40000.2 7Oryza sativa1E-0713927447 (7)_
Os02g40000.1 7Oryza sativa1E-0713927447 (7)_
GRMZM2G020401_P03 3.21Zea mays4E-85138849111 (5)S
Zm00001eb331790_P002 agpv5Zea mays4E-8513884910 (0)S
v1_GRMZM2G020401_P02 4a53Zea mays4E-8513884915 (5)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Sedlin_N(1) Sybindin(1)
TargetP: Cytoplasm (Class 5 C0.047; M0.197; S0.426; _0.463)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 140 aa (-cTP 137)
Molecular Weight 15.68 kDA(-cTP )
PI 8.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help