PPDB

The Plant Proteome Database

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AT2G20790.1   clathrin adaptor complexes medium subunit family protein

Lab Annot. protein binding / protein transporter
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20790.4 11Arabidopsis thaliana056299990 (0)C
AT2G20790.2 11Arabidopsis thaliana047510010011 (7)_
AT2G20790.3 11Arabidopsis thaliana0424999911 (7)_
Os12g34370.1 7Oryza sativa061958740 (0)C
Os12g34370.2 7Oryza sativa041560760 (0)_
Zm00001eb410820_P001 agpv5Zea mays062657740 (0)_
GRMZM2G082167_P01 3.21Zea mays059257730 (0)_
v1_GRMZM2G082167_P01 4a53Zea mays059257730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adap_comp_sub(1)
TargetP: Chloroplast (Class 5 C0.409; M0.211; S0.051; _0.253)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 613 aa (-cTP 586)
Molecular Weight 66.70 kDA(-cTP 63.61)
PI 5.18(-cTP 5.08)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2290Detail        [A. thaliana] Clp C1 TRAP
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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