PPDB

The Plant Proteome Database

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AT2G20760.1   Clathrin light chain protein

Lab Annot. protein binding / protein transporter/ structural molecule
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G40060.1 11Arabidopsis thaliana5E-61205597135 (16)_
AT3G51890.1 11Arabidopsis thaliana7E-5521751627 (2)_
Os06g51510.1 7Oryza sativa3E-53195597013 (13)_
Os04g58240.1 7Oryza sativa4E-52147707918 (18)_
Os07g27750.1 7Oryza sativa2E-4615556720 (0)_
Zm00001eb229020_P001 agpv5Zea mays3E-6023654630 (0)_
v1_GRMZM2G112805_P01 4a53Zea mays3E-6023654632 (2)_
GRMZM2G112805_P01 3.21Zea mays3E-60236546314 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Clathrin_lg_ch(3)
TargetP: Cytoplasm (Class 2 C0.189; M0.092; S0.038; _0.883)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 338 aa (-cTP 262)
Molecular Weight 37.22 kDA(-cTP )
PI 5.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
20166762(guard cells (Arabidopsis))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help