PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G20725.1   CAAX amino terminal protease family protein
Lab Annot. amino terminal protease 2 (CCAX-2)
Mapman: 29.5.7.1.1* protein.degradation.metalloprotease.M.M79
Curated Location plastid (Pubmed: 19224954 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G14270.1 11Arabidopsis thaliana2E-1524428480 (0)C
AT1G14270.4 11Arabidopsis thaliana2E-1314232540 (0)_
AT1G14270.3 11Arabidopsis thaliana2E-1314232540 (0)_
Os08g33900.1 7Oryza sativa8E-1327223440 (0)C
Os09g24670.1 7Oryza sativa8E-1326823430 (0)C
Os06g30910.1 7Oryza sativa3E-1023627450 (0)C
GRMZM2G066107_P01 3.21Zea mays3E-6323544630 (0)C
Zm00001eb306570_P002 agpv5Zea mays3E-6323544630 (0)C
v1_GRMZM2G066107_P01 4a53Zea mays3E-6323544630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CPBP(2) DUF5665(2)
TargetP: Chloroplast (Class 2 C0.902; M0.280; S0.018; _0.023)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 5 TMs
TAT position:
Length 301 aa (-cTP 283)
Molecular Weight 33.02 kDA(-cTP 31.05)
PI 6.98(-cTP 6.65)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help