PPDB

The Plant Proteome Database

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AT2G20720.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20710.2 11Arabidopsis thaliana2E-3431834520 (0)_
AT2G20710.1 11Arabidopsis thaliana6E-3431634510 (0)M
AT1G28020.1 11Arabidopsis thaliana4E-1219828480 (0)M
Os10g35760.2 7Oryza sativa5E-1130626430 (0)M
Os10g35760.1 7Oryza sativa5E-1130626430 (0)M
Os01g19490.1 7Oryza sativa3E-0716323451 (1)S
Zm00001eb340320_P003 agpv5Zea mays2E-0619923450 (0)M
Zm00001eb340320_P002 agpv5Zea mays3E-0619923450 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(4) PPR_2(2) PPR_3(2)
TargetP: Cytoplasm (Class 2 C0.017; M0.179; S0.266; _0.927)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 299 aa (-cTP 281)
Molecular Weight 34.49 kDA(-cTP )
PI 5.22(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help