PPDB

The Plant Proteome Database

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AT2G20650.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20650.2 11Arabidopsis thaliana05591001000 (0)S
AT4G28370.2 11Arabidopsis thaliana055583900 (0)S
AT4G28370.3 11Arabidopsis thaliana055583900 (0)S
Os07g31850.1 7Oryza sativa052072860 (0)M
Os07g43740.1 7Oryza sativa1E-075242510 (0)S
Os09g06770.1 7Oryza sativa1E-064936550 (0)S
Zm00001eb322160_P003 agpv5Zea mays052073860 (0)S
Zm00001eb322160_P002 agpv5Zea mays041576880 (0)_
Zm00001eb322160_P001 agpv5Zea mays036379900 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2921(2) FANCL_C(1) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4
TargetP: Secreted (Class 2 C0.003; M0.223; S0.885; _0.035)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 6 TMs
TAT position:
Length 559 aa (-cTP 525)
Molecular Weight 63.94 kDA(-cTP )
PI 8.62(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help