PPDB

The Plant Proteome Database

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AT2G20530.1   prohibitin 6

Lab Annot. ATPHB6 (PROHIBITIN 6)
Mapman: 35.1 not assigned.no ontology
Curated Location mitochondria (Pubmed: 17883375 )

TAIR curated location: mitochondrion14671022,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20530.2 11Arabidopsis thaliana028610010020 (15)_
AT4G28510.1 11Arabidopsis thaliana1E-169287879347 (42)_
AT1G03860.3 11Arabidopsis thaliana2E-1632908190141 (125)S
Os03g62490.1 7Oryza sativa5E-158290768615 (15)M
Os07g15880.1 7Oryza sativa7E-154268798841 (41)_
Os03g60000.1 7Oryza sativa2E-10323269780 (0)_
Zm00001eb064000_P001 agpv5Zea mays5E-15928776870 (0)M
AC217358.3_FGP005 3.21Zea mays5E-159287768770 (70)M
v1_AC217358.3_FGP005 4a53Zea mays5E-159287768783 (82)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Antigen_C(1) Band_7(1) DUF3692(2)
TargetP: Cytoplasm (Class 4 C0.010; M0.167; S0.471; _0.671)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 286 aa (-cTP 268)
Molecular Weight 31.64 kDA(-cTP )
PI 9.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15276431(Mitochondrial proteome)
15815986(Leaf)
15276431(mitochondrial membranes-suspension cells)
17151019(vacuole - suspension cell)
17432890(leaf total membranes)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21988472(vacuole (unfiltered data))
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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