PPDB

The Plant Proteome Database

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AT2G20520.1   FASCICLIN-like arabinogalactan 6

Lab Annot.
Mapman: 10.5.1 cell wall.cell wall proteins.AGPs
Curated Location
TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G03870.1 11Arabidopsis thaliana3E-812136071154 (112)S
AT5G44130.1 11Arabidopsis thaliana2E-771936176192 (130)S
AT5G03170.1 11Arabidopsis thaliana4E-4920846600 (0)S
Os01g47780.1 7Oryza sativa2E-54211496256 (56)S
Os05g48890.1 7Oryza sativa3E-5018652674 (4)S
Os02g20540.1 7Oryza sativa5E-47152546921 (21)S
GRMZM2G022931_P01 3.21Zea mays2E-53220476060 (58)S
Zm00001eb157310_P002 agpv5Zea mays2E-5322047600 (0)S
v1_GRMZM2G022931_P01 4a53Zea mays2E-53220476048 (48)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fasciclin(1)
TargetP: Secreted (Class 1 C0.043; M0.012; S0.966; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 247 aa (-cTP 181)
Molecular Weight 26.51 kDA(-cTP )
PI 5.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help