PPDB

 The Plant Proteome Database

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AT2G20280.1   Zinc finger C-x8-C-x5-C-x3-H type family protein
Lab Annot.
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g61830.1 7Oryza sativa8E-17737374858 (8)_
Zm00001eb148820_P002 agpv5Zea mays4E-16837374840 (0)_
Zm00001eb148820_P001 agpv5Zea mays4E-16837375850 (0)_
GRMZM2G032258_P01 3.21Zea mays4E-16837375851 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DFRP_C(2) Torus(2) zf-CCCH(2) zf-CCCH_2(2) zf-CCCH_3(2) zf-CCCH_4(3) zf_CCCH_4(3
TargetP: Cytoplasm (Class 2 C0.154; M0.090; S0.039; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 371 aa (-cTP 318)
Molecular Weight 42.39 kDA(-cTP )
PI 4.96(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1550Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3

* For details about the exprimental sources click here.

Published Proteomics Data

 20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help