PPDB

PPDB	The Plant Proteome Database

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AT2G20180.1 phytochrome interacting factor 3-like 5

Lab Annot.

PIF1 - phytochrome-interacting factor 1 (dual nucleus/cytosol)
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

cytosol (Pubmed: 15448264 )
nucleus (Pubmed: 15448264 )

TAIR curated location: nucleus15486102,16359394

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G20180.7 11 Arabidopsis thaliana 0 407 100 100 0 (0) _
AT2G20180.5 11 Arabidopsis thaliana 0 407 100 100 0 (0) _
AT2G20180.4 11 Arabidopsis thaliana 0 407 100 100 0 (0) _
Os03g56950.3 7 Oryza sativa 2E-41 153 51 67 0 (0) _
Os03g56950.4 7 Oryza sativa 2E-41 153 51 67 0 (0) _
Os03g56950.1 7 Oryza sativa 2E-41 153 51 67 0 (0) _
Zm00001eb050790_P002 agpv5 Zea mays 1E-40 244 42 57 0 (0) _
Zm00001eb050790_P003 agpv5 Zea mays 1E-40 244 42 57 0 (0) _
Zm00001eb050790_P001 agpv5 Zea mays 1E-40 244 42 57 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FAM176(1) HLH(1) Presenilin(1) SpoIIIAH(1) Tom22(1)
TargetP:	Cytoplasm (Class 1 C0.064; M0.072; S0.008; _0.928)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	407 aa (-cTP 346)
Molecular Weight	44.71 kDA(-cTP )
PI	6.73(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data