PPDB

The Plant Proteome Database

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AT2G20120.1   CONTINUOUS VASCULAR RING protein (DUF502)

Lab Annot. unknown function (DUF502)
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20120.2 11Arabidopsis thaliana02681001000 (0)_
AT2G20130.1 11Arabidopsis thaliana025396980 (0)_
AT2G18460.1 11Arabidopsis thaliana3E-12424969810 (0)_
Os05g45280.1 7Oryza sativa2E-13426872810 (0)_
Os02g16880.1 7Oryza sativa6E-12624073830 (0)_
Os01g64780.2 7Oryza sativa3E-12024363820 (0)C
GRMZM2G101533_P01 3.21Zea mays6E-13626872790 (0)_
Zm00001eb293370_P002 agpv5Zea mays6E-13626872790 (0)_
v1_GRMZM2G101533_P01 4a53Zea mays6E-13626872790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2417(1) DUF502(2) SR-25(1)
TargetP: Cytoplasm (Class 3 C0.294; M0.044; S0.009; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 268 aa (-cTP 208)
Molecular Weight 29.67 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help