PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G20100.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G20100.3 11Arabidopsis thaliana040888880 (0)C
AT2G20100.4 11Arabidopsis thaliana0298991000 (0)C
AT2G20100.2 11Arabidopsis thaliana0298991000 (0)C
Os05g14010.1 7Oryza sativa3E-5017556660 (0)M
Os02g17680.1 7Oryza sativa2E-4721950590 (0)_
Os01g13000.1 7Oryza sativa1E-4217850610 (0)C
Zm00001eb350430_P002 agpv5Zea mays2E-5118454650 (0)M
GRMZM2G072238_P03 3.21Zea mays2E-5118454650 (0)M
v1_GRMZM2G072238_P03 4a53Zea mays2E-5118454650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4337(1) Macoilin(1) Otopetrin(1)
TargetP: Chloroplast (Class 3 C0.664; M0.161; S0.004; _0.100)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 274)
Molecular Weight 40.06 kDA(-cTP 30.56)
PI 6.67(-cTP 6.90)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help