PPDB

PPDB	The Plant Proteome Database

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AT2G20030.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G28890.1 11 Arabidopsis thaliana 3E-143 437 57 67 0 (0) S
AT5G05810.1 11 Arabidopsis thaliana 1E-36 296 34 45 0 (0) S
AT4G40070.1 11 Arabidopsis thaliana 3E-28 183 40 51 0 (0) M
Os05g51780.1 7 Oryza sativa 1E-61 356 35 54 0 (0) S
Os06g48065.1 7 Oryza sativa 1E-40 140 50 65 0 (0) _
Os09g29310.1 7 Oryza sativa 1E-23 155 39 51 0 (0) S
Zm00001eb297810_P001 agpv5 Zea mays 3E-55 400 33 48 0 (0) S
GRMZM2G095025_P01 3.21 Zea mays 3E-55 400 33 48 0 (0) S
v1_GRMZM2G095025_P01 4a53 Zea mays 3E-55 400 33 48 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adeno_E3_CR2(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Tmpp129
TargetP:	Secreted (Class 1 C0.006; M0.012; S0.984; _0.136)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	390 aa (-cTP 369)
Molecular Weight	45.01 kDA(-cTP )
PI	9.10(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data