PPDB

The Plant Proteome Database

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AT2G19900.1   NADP-malic enzyme 1

Lab Annot. NADP-malic enzyme 1 (NADP-ME1)
Mapman: 8.2.10 TCA / org.transformation.other organic acid transformations.malic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G19900.2 11Arabidopsis thaliana04821001000 (0)_
AT5G25880.1 11Arabidopsis thaliana057176908 (3)_
AT1G79750.1 11Arabidopsis thaliana0572779157 (32)C
Os01g52500.3 7Oryza sativa0578789014 (14)_
Os01g52500.2 7Oryza sativa0578789014 (14)M
Os01g54030.1 7Oryza sativa056779902 (2)_
v1_GRMZM2G159724_P01 4a53Zea mays0578789124 (24)_
GRMZM2G159724_P01 3.21Zea mays0578789117 (15)_
v1_GRMZM2G159724_P03 4a53Zea mays0578789128 (28)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA_5(1) malic(1) Malic_M(1)
TargetP: Cytoplasm (Class 1 C0.037; M0.118; S0.095; _0.956)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 581 aa (-cTP 505)
Molecular Weight 64.28 kDA(-cTP )
PI 6.32(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help