PPDB

The Plant Proteome Database

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AT2G19770.1   profilin 5

Lab Annot. profilin 4 - pollen specific - actin monomer binding protein
Mapman: 31.1 cell.organisation
Curated Location
TAIR curated location: nucleus & phragmoplast & cytoplasm0011977080,15469496
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G29340.1 11Arabidopsis thaliana4E-9013491952 (2)_
AT2G19760.1 11Arabidopsis thaliana2E-701347585220 (170)_
AT5G56600.1 11Arabidopsis thaliana3E-70134748330 (26)_
Os10g17660.1 7Oryza sativa4E-7813478910 (0)_
Os10g17680.1 7Oryza sativa4E-7813478910 (0)_
Os06g05880.1 7Oryza sativa1E-75133778832 (32)_
GRMZM5G876285_P02 3.21Zea mays8E-77134779053 (53)_
Zm00001eb371220_P001 agpv5Zea mays8E-7713477900 (0)_
GRMZM5G876285_P03 3.21Zea mays6E-76134769022 (22)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Profilin(1)
TargetP: Cytoplasm (Class 2 C0.117; M0.099; S0.111; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 134 aa (-cTP 122)
Molecular Weight 14.55 kDA(-cTP )
PI 5.02(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19546170(mature pollen grains)
19508356(mature pollen grains and pollen tubes)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help