PPDB

PPDB	The Plant Proteome Database

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AT2G18950.1 homogentisate phytyltransferase 1

Lab Annot.

vte2 - homogentisate phytyltransferase (HPT1)
Mapman: 16.1.3.2 secondary metabolism.isoprenoids.tocopherol biosynthesis.homogentisate phytyltransferase

Curated Location

plastid (Pubmed: 23198870 18431481 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G18950.2 11 Arabidopsis thaliana 0 314 100 100 0 (0) C
AT3G11945.1 11 Arabidopsis thaliana 3E-49 302 38 55 29 (29) C
AT3G11945.2 11 Arabidopsis thaliana 7E-49 302 38 55 25 (25) C
Os06g44840.1 7 Oryza sativa 1E-168 331 72 83 0 (0) M
Os06g44840.2 7 Oryza sativa 4E-140 331 64 73 0 (0) M
Os06g43880.1 7 Oryza sativa 3E-114 324 53 69 0 (0) C
Zm00001eb389370_P002 agpv5 Zea mays 4E-168 324 72 84 0 (0) M
GRMZM2G048472_P01 3.21 Zea mays 4E-168 324 72 84 4 (4) M
Zm00001eb389370_P001 agpv5 Zea mays 6E-147 324 66 77 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	UbiA(1)
TargetP:	Chloroplast (Class 3 C0.616; M0.087; S0.073; _0.110)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	9 TMs
Aramemnon:	9 TMs
TAT position:
Length	393 aa (-cTP 357)
Molecular Weight	43.91 kDA(-cTP 39.95)
PI	9.74(-cTP 9.68)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data