PPDB

PPDB	The Plant Proteome Database

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AT2G18650.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G30400.1 11 Arabidopsis thaliana 3E-148 466 60 69 0 (0) C
AT5G40250.1 11 Arabidopsis thaliana 3E-70 368 39 55 0 (0) _
AT1G23980.1 11 Arabidopsis thaliana 1E-56 331 37 51 0 (0) C
Os08g34550.1 7 Oryza sativa 2E-78 367 45 58 0 (0) _
Os02g54830.1 7 Oryza sativa 1E-77 449 38 53 0 (0) _
Os02g50930.1 7 Oryza sativa 5E-58 332 39 53 0 (0) M
Zm00001eb177000_P001 agpv5 Zea mays 6E-76 372 45 61 0 (0) _
GRMZM6G174411_P01 3.21 Zea mays 6E-76 372 45 61 0 (0) _
Zm00001eb257520_P001 agpv5 Zea mays 5E-75 443 38 51 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) MBOAT_2(1) Prok-RING_1(2) Prok-RING_4(2) Rad50_zn_hook(2) RINGv(1) zf
TargetP:	Chloroplast (Class 4 C0.757; M0.010; S0.063; _0.469)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	423 aa (-cTP 392)
Molecular Weight	47.29 kDA(-cTP 43.94)
PI	7.59(-cTP 6.96)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data