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The Plant Proteome Database

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AT2G18510.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G49760.2 11Arabidopsis thaliana5E-331774062276 (128)S
AT1G49760.1 11Arabidopsis thaliana5E-331774062295 (147)S
AT1G54080.1 11Arabidopsis thaliana1E-32197355813 (11)M
Os10g31900.1 7Oryza sativa1E-15129775830 (0)_
Os04g42600.2 7Oryza sativa2E-31162416514 (14)S
Os04g42600.1 7Oryza sativa2E-31162416514 (14)S
Zm00001eb222330_P001 agpv5Zea mays8E-15132972780 (0)_
v1_GRMZM2G102639_P01 4a53Zea mays8E-151329727815 (15)_
GRMZM2G102639_P01 3.21Zea mays8E-15132972781 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nup35_RRM_2(1) OB_RNB(2) RRM_1(2) RRM_5(1) RRM_7(2)
TargetP: Cytoplasm (Class 4 C0.089; M0.328; S0.078; _0.662)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 363 aa (-cTP 353)
Molecular Weight 39.89 kDA(-cTP )
PI 7.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2242Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help