PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G18450.1   succinate dehydrogenase 1-2
Lab Annot. succinate dehydrogenase (ubiquinone) flavoprotein subunit
Mapman: 8.1.7 TCA / org.transformation.TCA.succinate dehydrogenase
Curated Location
TAIR curated location: mitochondrion14671022,12374303,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G66760.1 11Arabidopsis thaliana06358793236 (191)M
AT5G14760.1 11Arabidopsis thaliana5E-7958334481 (1)C
Os07g04240.1 7Oryza sativa0606889442 (42)M
Os02g04170.2 7Oryza sativa2E-7856034500 (0)C
Os02g04170.1 7Oryza sativa2E-7856034500 (0)C
Zm00001eb117970_P002 agpv5Zea mays056190970 (0)M
Zm00001eb299550_P003 agpv5Zea mays056190970 (0)M
GRMZM2G064799_P02 3.21Zea mays0561909755 (48)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DAO(1) FAD_binding_2(1) FAD_binding_3(1) GIDA(2) HI0933_like(2) Pyr_redox_2(2) S
TargetP: Mitochondria (Class 3 C0.371; M0.826; S0.022; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 632 aa (-cTP 598)
Molecular Weight 69.36 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
872Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type (1-8); k2k3 (9-10)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1744Detail        [A. thaliana] Mep-6
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2141Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2143Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2144Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2146Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2288Detail        [A. thaliana] Clp C1 WT
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help