PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G18300.3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot. basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G18300.2 11Arabidopsis thaliana03331001000 (0)_
AT2G18300.1 11Arabidopsis thaliana033399990 (0)_
AT4G36540.1 11Arabidopsis thaliana4E-11632360690 (0)_
Os09g32510.5 7Oryza sativa2E-4213557710 (0)_
Os03g58830.1 7Oryza sativa3E-4212661690 (0)_
Os02g47660.1 7Oryza sativa3E-4213854670 (0)_
Zm00001eb315870_P001 agpv5Zea mays2E-4315055680 (0)_
Zm00001eb315870_P002 agpv5Zea mays2E-4315055680 (0)_
GRMZM5G818643_P01 3.21Zea mays2E-4315055680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF908(1) HLH(1) TMEM70(1)
TargetP: Cytoplasm (Class 4 C0.084; M0.193; S0.043; _0.566)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 364 aa (-cTP 312)
Molecular Weight 40.88 kDA(-cTP )
PI 6.68(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help