PPDB

PPDB	The Plant Proteome Database

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AT2G18260.1 syntaxin of plants 112

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G18260.2 11 Arabidopsis thaliana 0 305 100 100 0 (0) _
AT1G08560.1 11 Arabidopsis thaliana 2E-62 294 38 64 0 (0) _
AT1G61290.1 11 Arabidopsis thaliana 1E-61 310 35 59 1 (1) _
Os03g52650.1 7 Oryza sativa 8E-66 292 39 61 0 (0) _
Os06g39050.1 7 Oryza sativa 7E-58 310 36 57 0 (0) _
Os02g11890.1 7 Oryza sativa 2E-52 298 36 55 0 (0) _
Zm00001eb215350_P001 agpv5 Zea mays 1E-66 302 38 59 0 (0) _
v1_GRMZM2G100478_P01 4a53 Zea mays 1E-66 302 38 59 1 (1) _
GRMZM2G100478_P01 3.21 Zea mays 1E-66 302 38 59 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_p24(2) Casc1_N(3) Cep57_MT_bd(1) DUF2096(2) Enkurin(3) ParB(1) Prefoldin(
TargetP:	Cytoplasm (Class 2 C0.042; M0.204; S0.075; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	305 aa (-cTP 285)
Molecular Weight	35.04 kDA(-cTP )
PI	6.07(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)

Comparative Proteomics Data