PPDB

 The Plant Proteome Database

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AT2G18245.1   alpha/beta-Hydrolases superfamily protein
Lab Annot. alpha/beta-Hydrolases
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19970.4 11Arabidopsis thaliana2E-7928643620 (0)M
AT3G19970.1 11Arabidopsis thaliana2E-7928643620 (0)M
AT3G19970.3 11Arabidopsis thaliana2E-7928643620 (0)M
Os02g04110.1 7Oryza sativa5E-8827548640 (0)C
Os06g51390.2 7Oryza sativa6E-8434739610 (0)S
Os06g51390.1 7Oryza sativa6E-8434739610 (0)S
Zm00001eb231500_P001 agpv5Zea mays9E-8827449650 (0)C
GRMZM5G871910_P02 3.21Zea mays9E-8827449650 (0)C
v1_AC192244.3_FGP008 4a53Zea mays9E-8827249650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF829(2)
TargetP: Chloroplast (Class 3 C0.629; M0.132; S0.003; _0.037)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 398 aa (-cTP 314) (-lTP 335)
Molecular Weight 44.85 kDA(-cTP 35.54)(-lTP 38.03)
PI 9.48(-cTP 8.77)(-lTP 8.925)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help