PPDB

The Plant Proteome Database

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AT2G18220.1   Noc2p family

Lab Annot. Noc2p family
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55510.1 11Arabidopsis thaliana1E-10452934570 (0)_
AT3G55510.2 11Arabidopsis thaliana3E-10148935580 (0)_
Os10g35280.1 7Oryza sativa068447652 (2)_
Os12g06610.1 7Oryza sativa5E-10854435550 (0)M
Zm00001eb220970_P001 agpv5Zea mays063652690 (0)_
GRMZM2G374385_P01 3.21Zea mays063652690 (0)_
Zm00001eb220970_P002 agpv5Zea mays074349650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2385(1) Noc2(1) Nop14(3)
TargetP: Cytoplasm (Class 3 C0.041; M0.070; S0.408; _0.835)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 764 aa (-cTP 755)
Molecular Weight 86.96 kDA(-cTP )
PI 6.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1471Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clps (rep. 1-2)
1745Detail        [A. thaliana] Col-0
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help