PPDB

PPDB	The Plant Proteome Database

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AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein

Lab Annot.

Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G18090.2 11 Arabidopsis thaliana 0 824 96 96 0 (0) _
AT3G51120.1 11 Arabidopsis thaliana 1E-112 400 46 64 1 (1) _
AT2G16485.2 11 Arabidopsis thaliana 2E-86 304 46 64 0 (0) _
Os09g36090.1 7 Oryza sativa 2E-95 368 44 63 18 (18) _
Os10g36810.1 7 Oryza sativa 9E-88 366 43 63 0 (0) C
Os05g34780.1 7 Oryza sativa 1E-45 307 32 53 0 (0) M
Zm00001eb220400_P004 agpv5 Zea mays 9E-94 370 44 64 0 (0) _
Zm00001eb220400_P001 agpv5 Zea mays 1E-93 370 44 64 0 (0) _
v1_GRMZM2G393471_P01 4a53 Zea mays 2E-93 379 44 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C5HCH(2) GYF(1) GYF_2(1) SWIB(1) zf-HC5HC2H(1) zf-HC5HC2H_2(1) zf-UDP(2)
TargetP:	Cytoplasm (Class 2 C0.209; M0.046; S0.096; _0.817)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	824 aa (-cTP 761)
Molecular Weight	91.13 kDA(-cTP )
PI	6.00(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data