PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G17900.1   SET domain group 37
Lab Annot. SET domain group 37
Mapman: 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G19640.1 11Arabidopsis thaliana2E-1329226420 (0)_
AT2G19640.2 11Arabidopsis thaliana3E-1329226420 (0)_
AT3G21820.1 11Arabidopsis thaliana9E-097843570 (0)_
Os03g49730.2 7Oryza sativa047855730 (0)_
Os03g49730.1 7Oryza sativa047955720 (0)_
Os03g49730.3 7Oryza sativa7E-13834555720 (0)_
v1_GRMZM2G457881_P01 4a53Zea mays048354720 (0)M
Zm00001eb216690_P002 agpv5Zea mays048354720 (0)M
GRMZM2G457881_P01 3.21Zea mays048354720 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SCAB_CC(1) SET(1) TPR_12(1) zf-MYND(3)
TargetP: Cytoplasm (Class 5 C0.056; M0.386; S0.028; _0.577)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 485 aa (-cTP 483)
Molecular Weight 55.36 kDA(-cTP )
PI 8.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help