PPDB

 The Plant Proteome Database

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AT2G17750.1   NEP-interacting protein 1
Lab Annot. NIP1 (DUF239) - interacts with NEP RPOTmp
Mapman: 28.3* DNA.plastid nucleoid interacting
Curated Location thylakoid (Pubmed: 23198870 18567673 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G19360.1 11Arabidopsis thaliana4E-16242154700 (0)S
AT2G44220.1 11Arabidopsis thaliana3E-14040547690 (0)S
AT2G44210.1 11Arabidopsis thaliana6E-136407486921 (8)S
Os07g10530.1 7Oryza sativa2E-13538147700 (0)S
Os03g59240.1 7Oryza sativa7E-13437048710 (0)S
Os07g38590.1 7Oryza sativa7E-13337647702 (2)S
GRMZM2G082312_P01 3.21Zea mays2E-13741145670 (0)S
Zm00001eb061630_P001 agpv5Zea mays2E-13741145670 (0)S
v1_GRMZM2G082312_P02 4a53Zea mays2E-13741145670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Neprosin(1) Neprosin_AP(1)
TargetP: Secreted (Class 3 C0.026; M0.060; S0.765; _0.332)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 396 aa (-cTP 383)
Molecular Weight 45.21 kDA(-cTP )
PI 8.84(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help