PPDB

The Plant Proteome Database

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AT2G17720.1   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Lab Annot. oxidoreductase, 2OG-Fe(II) oxygenase protein
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35810.1 11Arabidopsis thaliana1E-15829278870 (0)M
AT4G35810.2 11Arabidopsis thaliana1E-15829278870 (0)M
AT5G66060.1 11Arabidopsis thaliana1E-15729173830 (0)M
Os02g58070.1 7Oryza sativa8E-12627463760 (0)M
Os10g35470.1 7Oryza sativa7E-12321775880 (0)_
Os10g27340.2 7Oryza sativa4E-8120957717 (7)M
Zm00001eb190810_P002 agpv5Zea mays4E-12826266790 (0)M
Zm00001eb190810_P001 agpv5Zea mays4E-12826266790 (0)M
GRMZM2G025867_P01 3.21Zea mays4E-12826266790 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 2OG-FeII_Oxy(1) 2OG-FeII_Oxy_3(1)
TargetP: Mitochondria (Class 2 C0.048; M0.716; S0.025; _0.038)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 291 aa (-cTP 228)
Molecular Weight 32.69 kDA(-cTP )
PI 7.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2247Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21325567(root-proteome (wt & det3))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help