PPDB

PPDB	The Plant Proteome Database

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AT2G17650.1 AMP-dependent synthetase and ligase family protein

Lab Annot.

Mapman: 11.1.8 lipid metabolism.FA synthesis and FA elongation.acyl coa ligase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G20560.1 11 Arabidopsis thaliana 0 556 63 76 0 (0) _
AT1G20560.2 11 Arabidopsis thaliana 0 480 63 75 0 (0) S
AT3G16910.1 11 Arabidopsis thaliana 0 564 51 66 215 (172) _
Os03g04120.1 7 Oryza sativa 0 556 60 74 0 (0) _
Os03g04130.1 7 Oryza sativa 0 604 55 71 0 (0) C
Os01g24030.1 7 Oryza sativa 0 579 56 71 0 (0) S
v1_GRMZM2G465806_P02 4a53 Zea mays 0 557 59 74 0 (0) M
Zm00001eb002720_P001 agpv5 Zea mays 0 557 59 74 0 (0) M
Zm00001eb442060_P001 agpv5 Zea mays 0 557 59 74 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AMP-binding(1) AMP-binding_C(1)
TargetP:	Mitochondria (Class 1 C0.010; M0.944; S0.011; _0.083)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	603 aa (-cTP 595)
Molecular Weight	67.46 kDA(-cTP )
PI	6.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1651	Detail								leaf [A. thaliana]	plastoglobules plastoglobule	wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2007	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data